Many tourists flock to popular destinations like Tokyo or Kyoto.
But, several lesser-known islands provide a quieter, more real experience.
Exploring these hidden gems allows you to uncover Japan’s rich history and natural beauty without the crowds.
Why settle for the well-trodden paths when you can find adventure in places few have discovered?
Here are 5 lesser-known islands in Japan to visit.
1) Nagasaki’s Iki Island
Iki Island is a hidden gem waiting to be discovered in Nagasaki.
It can be easily reached via a jetfoil ferry from Hakata Port in Fukuoka or by flight from Fukuoka or Nagasaki Airports.
The flights are quick, but be prepared for the propeller planes, which might feel daunting.
Once you arrive, you’ll find a beach with beautiful emerald green seas, especially near Tatsunoshima Island.
A 40-minute boat tour from Katsumoto Port takes you to this stunning spot, available from March to November.
For those looking for relaxation, Iki Island offers serene beaches and calming onsen.
The island’s location between South Korea and Fukuoka might surprise you; it’s a perfect getaway with its unique charm and natural beauty.
Visiting Iki Island offers a mix of adventure and relaxation, making it a perfect addition to your travel itinerary in Japan.
2) Shikinejima in Tokyo
Shikinejima is a small, picturesque island just three hours away from Tokyo by high-speed ferry.
With its rugged coves, sandy beaches, and minimal development, it offers a stark contrast to the bustling city life.
Due to its small size—eight square kilometres—Shikinejima can be explored on foot or by bicycle.
The island has few roads and just one traffic light, making it a peaceful retreat.
Outdoor activities abound here.
You can go scuba diving, fishing, hiking, or enjoy the island’s natural beauty.
The walking paths criss-crossing the island offer endless opportunities for serene exploration.
3) Shodoshima in Kagawa
Shodoshima, nestled in Kagawa Prefecture, is Japan’s olive island.
You’ve got to check out the olive plantations and taste some of the local soy sauce.
The island’s Mediterranean vibe is inviting, with beautiful beaches and resorts. Its stunning coasts are also worth exploring.
The mountainous interior contains the famous Kankakei Gorge.
Shodoshima also hosts part of the Setouchi Triennale, a contemporary art festival.
It’s the place to be for art enthusiasts.
Getting there is easy with regular ferries from the main island of Honshu.
Take advantage of this unique destination.
4) Amami Oshima in Kagoshima
Amami Oshima is an incredible hidden gem in Kagoshima Prefecture.
It has lush landscapes and stunning beaches.
It combines Japanese and Okinawan cultures in a unique way.
You can explore the second-largest mangrove forest in Japan here.
Spot rare wildlife like the Amami rabbit and the Lidth’s jay while you’re at it.
Local cuisine is a must-try.
Check out the yakitori joints, especially one famous for its keihan rice, a regional speciality.
The island is also a UNESCO World Heritage site.
5) Taketomi Island in Okinawa
Taketomi Island is a hidden gem in Okinawa, Japan.
The island recreates a traditional Ryukyu village, recreating a bygone era.
Imagine strolling down streets lined with red-roofed houses and stone walls.
The island has clear waters and white-sand beaches.
It’s an idyllic spot for swimming and relaxing in the sun.
Explore the island on foot or by renting a bicycle.
You can even enjoy a unique water buffalo cart ride through the village.
A short ferry ride from Ishigaki Island, Taketomi is easily accessible yet feels worlds away.
Plan a visit to experience the perfect blend of culture and nature.